Difference between revisions of "TSS:Hg 100427.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SMU-1= | ||
| + | |all_trans=HGNC:924 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance_to_tss= | + | |distance=-287 |
| − | |entrez_id= | + | |distance_to_tss=4469 |
| + | |end=33113167 | ||
| + | |end_of_center_position=33113162 | ||
| + | |entrez_id=113219452 | ||
| + | |fSAP57= | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | | | + | |gene_description=microRNA 12117 |
| − | | | + | |gene_id=2683 |
| − | |gene_type= | + | |gene_name=beta-1,4-galactosyltransferase 1 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:924 |
| − | |nearest_promoter_id= | + | |gene_symbol=B4GALT1 |
| − | |nearest_refseq= | + | |gene_synonyms=beta4Gal-T1 |
| − | |nearest_unigene= | + | |gene_type=ncRNA |
| + | |hgnc_mgi_id=HGNC:924 | ||
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_162131 | ||
| + | |nearest_refseq=NR_162131 | ||
| + | |nearest_unigene= | ||
| + | |num_trans=2683 | ||
| + | |species=human | ||
| + | |start=33113155 | ||
| + | |start_of_center_position=33113161 | ||
| + | |strand=- | ||
| + | |transcript_name=AY864848 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100427.1 | |tss_id=hg_100427.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:43, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33113161 |
|---|---|
| End of the center position in the TSS region: | 33113162 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY864848 |
|---|---|
| Distance: | -287 |
| Num_trans: | 2683 |
| All_trans: | HGNC:924 |
TATA-Box annotation
| Distance to TSS: | 4469 |
|---|---|
| Nearest PromoterID: | NR_162131 |
| Entrez ID: | 113219452 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162131 |
| Nearest Ensembl: | |
| Gene Name: | beta-1,4-galactosyltransferase 1 |
| Gene Alias: | - |
| Gene Description: | microRNA 12117 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
