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Difference between revisions of "TSS:Hg 99992.1"

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Line 7: Line 7:
 
|NFIB2=
 
|NFIB2=
 
|NFIB3=
 
|NFIB3=
|all_trans=ENST00000493697.1:0 uc064seh.1:0
+
|all_trans=HGNC:7785
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
 
|distance=0
 
|distance=0
|distance_to_tss=6022
+
|distance_to_tss=11
 
|end=14308042
 
|end=14308042
 
|end_of_center_position=14308024
 
|end_of_center_position=14308024
 
|entrez_id=4781
 
|entrez_id=4781
 
|gc_percent=0.457711
 
|gc_percent=0.457711
|gene_alias=CTF
+
|gene_alias=CTF{{!}}HMGIC/NFIB{{!}}MACID{{!}}NF-I/B{{!}}NF1-B{{!}}NFI-B{{!}}NFI-RED{{!}}NFIB2{{!}}NFIB3
 
|gene_description=nuclear factor I B
 
|gene_description=nuclear factor I B
 
|gene_id=4781
 
|gene_id=4781
|gene_name=nuclear factor I/B
+
|gene_name=nuclear factor I B
 
|gene_source=HGNC:7785
 
|gene_source=HGNC:7785
 
|gene_symbol=NFIB
 
|gene_symbol=NFIB
Line 26: Line 26:
 
|hgnc_mgi_id=HGNC:7785
 
|hgnc_mgi_id=HGNC:7785
 
|nearest_ensembl=ENSG00000147862
 
|nearest_ensembl=ENSG00000147862
|nearest_promoter_id=NM_005596
+
|nearest_promoter_id=NM_001369474
 
|nearest_refseq=NM_005596
 
|nearest_refseq=NM_005596
 
|nearest_unigene=Hs.644095
 
|nearest_unigene=Hs.644095
|num_trans=2
+
|num_trans=4781
 
|species=human
 
|species=human
 
|start=14308005
 
|start=14308005
 
|start_of_center_position=14308023
 
|start_of_center_position=14308023
 
|strand=-
 
|strand=-
|transcript_name=ENST00000493697.1 uc064seh.1
+
|transcript_name=ENST00000493697.1
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_99992.1
 
|tss_id=hg_99992.1

Latest revision as of 18:42, 22 July 2021

Basic information about the TSS


TSS ID:hg_99992.1
Species:human
Chr:chr9
TSS Classification:no
Start:14308005
End:14308042
Strand:-
TSS Score:1
Start of the center position in the TSS region:14308023
End of the center position in the TSS region:14308024



Gene and protein annotation


Transcript_name:ENST00000493697.1
Distance:0
GeneID:4781
HGNC/MGI_ID:HGNC:7785
UniProt_ID:U3KPY9
Gene_name:nuclear factor I B
Gene_symbol:NFIB
Gene_synonyms:NFI-RED NFIB2 NFIB3
Gene_source:HGNC:7785



Transcript annotation


Transcript_name:ENST00000493697.1
Distance:0
Num_trans:4781
All_trans:HGNC:7785



TATA-Box annotation


Distance to TSS:11
Nearest PromoterID:NM_001369474
Entrez ID:4781
Nearest Unigene:Hs.644095
Nearest Refseq:NM_005596
Nearest Ensembl:ENSG00000147862
Gene Name:nuclear factor I B
Gene Alias:CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
Gene Description:nuclear factor I B
Gene Type:protein-coding
CpG%:0.02
GC%:0.457711
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):