Difference between revisions of "TSS:Hg 100063.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:49775 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-482 |
|distance_to_tss=-655 | |distance_to_tss=-655 | ||
|end=14992673 | |end=14992673 | ||
| Line 9: | Line 10: | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=histone PARylation factor 1 pseudogene |
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=chloride voltage-gated channel 3 pseudogene 1 | ||
| + | |gene_source=HGNC:49775 | ||
| + | |gene_symbol=CLCN3P1 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:49775 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_003920 | |nearest_promoter_id=NR_003920 | ||
|nearest_refseq=NR_003920 | |nearest_refseq=NR_003920 | ||
|nearest_unigene=Hs.431257 | |nearest_unigene=Hs.431257 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=14992670 | |start=14992670 | ||
|start_of_center_position=14992671 | |start_of_center_position=14992671 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000652088.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100063.1 | |tss_id=hg_100063.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:35, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14992671 |
|---|---|
| End of the center position in the TSS region: | 14992672 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000652088.1 |
|---|---|
| Distance: | -482 |
| Num_trans: | |
| All_trans: | HGNC:49775 |
TATA-Box annotation
| Distance to TSS: | -655 |
|---|---|
| Nearest PromoterID: | NR_003920 |
| Entrez ID: | 389705 |
| Nearest Unigene: | Hs.431257 |
| Nearest Refseq: | NR_003920 |
| Nearest Ensembl: | |
| Gene Name: | chloride voltage-gated channel 3 pseudogene 1 |
| Gene Alias: | - |
| Gene Description: | histone PARylation factor 1 pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
