Difference between revisions of "TSS:Hg 100066.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF355387:-46 MA590964:-46 LF355386:184 MA590963:184 LF355388:-228 MA590965:-228 LF355389:-389 MA590966:-389 LF355385:410 MA590962:410 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-46 |
| − | |distance_to_tss= | + | |distance_to_tss=80774 |
|end=15169444 | |end=15169444 | ||
|end_of_center_position=15169444 | |end_of_center_position=15169444 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_152574 | |nearest_refseq=NM_152574 | ||
|nearest_unigene=Hs.563630 | |nearest_unigene=Hs.563630 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=15169443 | |start=15169443 | ||
|start_of_center_position=15169443 | |start_of_center_position=15169443 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355387 MA590964 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100066.1 | |tss_id=hg_100066.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:29, 11 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15169443 |
|---|---|
| End of the center position in the TSS region: | 15169444 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF355387 MA590964 |
|---|---|
| Distance: | -46 |
| Num_trans: | 10 |
| All_trans: | LF355387:-46 MA590964:-46 LF355386:184 MA590963:184 LF355388:-228 MA590965:-228 LF355389:-389 MA590966:-389 LF355385:410 MA590962:410 |
TATA-Box annotation
| Distance to TSS: | 80774 |
|---|---|
| Nearest PromoterID: | NM_001168342 |
| Entrez ID: | 158219 |
| Nearest Unigene: | Hs.563630 |
| Nearest Refseq: | NM_152574 |
| Nearest Ensembl: | ENSG00000155158 |
| Gene Name: | TTC39B |
| Gene Alias: | C9orf52 |
| Gene Description: | tetratricopeptide repeat domain 39B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
