Difference between revisions of "TSS:Hg 100154.1"
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{{TSSDetail | {{TSSDetail | ||
|ADRP= | |ADRP= | ||
| − | |all_trans= | + | |all_trans=HGNC:248 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=19127499 | |end=19127499 | ||
|end_of_center_position=19127490 | |end_of_center_position=19127490 | ||
|entrez_id=123 | |entrez_id=123 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=ADFP | + | |gene_alias=ADFP{{!}}ADRP |
|gene_description=perilipin 2 | |gene_description=perilipin 2 | ||
|gene_id=123 | |gene_id=123 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:248 | |hgnc_mgi_id=HGNC:248 | ||
|nearest_ensembl=ENSG00000147872 | |nearest_ensembl=ENSG00000147872 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001122 |
|nearest_refseq=NM_001122 | |nearest_refseq=NM_001122 | ||
|nearest_unigene=Hs.3416 | |nearest_unigene=Hs.3416 | ||
| − | |num_trans= | + | |num_trans=123 |
|species=human | |species=human | ||
|start=19127480 | |start=19127480 | ||
|start_of_center_position=19127489 | |start_of_center_position=19127489 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380464.7 ENST00000472715 | + | |transcript_name=ENST00000276914.7 ENST00000380464.7 ENST00000472715.1 AK296125 AK312983 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100154.1 | |tss_id=hg_100154.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DJK9 Q5SYF3 | + | |uniprot_id=B4DJK9 Q5SYF3 Q6FHZ7 Q99541 |
}} | }} | ||
Latest revision as of 17:37, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19127489 |
|---|---|
| End of the center position in the TSS region: | 19127490 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000276914.7 ENST00000380464.7 ENST00000472715.1 AK296125 AK312983 |
|---|---|
| Distance: | 0 |
| Num_trans: | 123 |
| All_trans: | HGNC:248 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001122 |
| Entrez ID: | 123 |
| Nearest Unigene: | Hs.3416 |
| Nearest Refseq: | NM_001122 |
| Nearest Ensembl: | ENSG00000147872 |
| Gene Name: | perilipin 2 |
| Gene Alias: | ADFP|ADRP |
| Gene Description: | perilipin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
