Difference between revisions of "TSS:Hg 100269.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|P15= | |P15= | ||
|TP15= | |TP15= | ||
| − | |all_trans=AM393264:-490 AM393391:-490 CR536529:-490 AM392641:-490 AM392962:-490 AB462998:-490 | + | |all_trans=LF355647:0 MA591224:0 LF355648:-117 MA591225:-117 AM393264:-490 AM393391:-490 CR536529:-490 AM392641:-490 AM392962:-490 AB462998:-490 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=845 |
|end=22008463 | |end=22008463 | ||
|end_of_center_position=22008461 | |end_of_center_position=22008461 | ||
|entrez_id=1030 | |entrez_id=1030 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
| − | |gene_alias=CDK4I | + | |gene_alias=CDK4I{{!}}INK4B{{!}}MTS2{{!}}P15{{!}}TP15{{!}}p15INK4b |
|gene_description=cyclin dependent kinase inhibitor 2B | |gene_description=cyclin dependent kinase inhibitor 2B | ||
|gene_id=1030 | |gene_id=1030 | ||
| − | |gene_name= | + | |gene_name=CDKN2B |
|gene_source=HGNC:1788 | |gene_source=HGNC:1788 | ||
|gene_symbol=CDKN2B | |gene_symbol=CDKN2B | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004936 | |nearest_refseq=NM_004936 | ||
|nearest_unigene=Hs.72901 | |nearest_unigene=Hs.72901 | ||
| − | |num_trans= | + | |num_trans=10 |
|p15INK4b= | |p15INK4b= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=22008460 | |start_of_center_position=22008460 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355647 MA591224 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100269.1 | |tss_id=hg_100269.1 | ||
Latest revision as of 16:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22008460 |
|---|---|
| End of the center position in the TSS region: | 22008461 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF355647 MA591224 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | LF355647:0 MA591224:0 LF355648:-117 MA591225:-117 AM393264:-490 AM393391:-490 CR536529:-490 AM392641:-490 AM392962:-490 AB462998:-490 |
TATA-Box annotation
| Distance to TSS: | 845 |
|---|---|
| Nearest PromoterID: | NM_004936 |
| Entrez ID: | 1030 |
| Nearest Unigene: | Hs.72901 |
| Nearest Refseq: | NM_004936 |
| Nearest Ensembl: | ENSG00000147883 |
| Gene Name: | CDKN2B |
| Gene Alias: | CDK4I|INK4B|MTS2|P15|TP15|p15INK4b |
| Gene Description: | cyclin dependent kinase inhibitor 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
