Difference between revisions of "TSS:Hg 100570.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|SLP-2= | |SLP-2= | ||
| − | |all_trans= | + | |all_trans=HGNC:14559 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 10: | Line 10: | ||
|entrez_id=30968 | |entrez_id=30968 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=HSPC108 | + | |gene_alias=HSPC108{{!}}SLP-2 |
|gene_description=stomatin like 2 | |gene_description=stomatin like 2 | ||
|gene_id=30968 | |gene_id=30968 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_013442 | |nearest_refseq=NM_013442 | ||
|nearest_unigene=Hs.3439 | |nearest_unigene=Hs.3439 | ||
| − | |num_trans= | + | |num_trans=30968 |
|species=human | |species=human | ||
|start=35103162 | |start=35103162 | ||
|start_of_center_position=35103169 | |start_of_center_position=35103169 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AF190167 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100570.1 | |tss_id=hg_100570.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 17:46, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35103169 |
|---|---|
| End of the center position in the TSS region: | 35103170 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF190167 |
|---|---|
| Distance: | 6 |
| Num_trans: | 30968 |
| All_trans: | HGNC:14559 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001287033 |
| Entrez ID: | 30968 |
| Nearest Unigene: | Hs.3439 |
| Nearest Refseq: | NM_013442 |
| Nearest Ensembl: | ENSG00000165283 |
| Gene Name: | stomatin like 2 |
| Gene Alias: | HSPC108|SLP-2 |
| Gene Description: | stomatin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
