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Difference between revisions of "TSS:Hg 100677.1"

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Line 4: Line 4:
 
|NM=
 
|NM=
 
|Uae1=
 
|Uae1=
|all_trans=BC121179:0 ENST00000539208.5:-36 uc011lpl.4:-36 AK295562:-36 ENST00000447283.6:74 uc010mlg.5:74 ENST00000377902.5:-90 NM_001190384:-90 NM_005476:-90 NM_001190383:-90 uc010mlh.5:-90
+
|all_trans=HGNC:23657
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.155
 
|cpg_percent=0.155
 
|distance=0
 
|distance=0
|distance_to_tss=93
+
|distance_to_tss=42
 
|end=36258409
 
|end=36258409
 
|end_of_center_position=36258406
 
|end_of_center_position=36258406
 
|entrez_id=10020
 
|entrez_id=10020
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=DMRV
+
|gene_alias=DMRV{{!}}GLCNE{{!}}IBM2{{!}}NM{{!}}Uae1
 
|gene_description=glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
 
|gene_description=glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
 
|gene_id=10020
 
|gene_id=10020
Line 23: Line 23:
 
|hgnc_mgi_id=HGNC:23657
 
|hgnc_mgi_id=HGNC:23657
 
|nearest_ensembl=ENSG00000159921
 
|nearest_ensembl=ENSG00000159921
|nearest_promoter_id=NM_001190383
+
|nearest_promoter_id=NM_005476
 
|nearest_refseq=NM_005476
 
|nearest_refseq=NM_005476
 
|nearest_unigene=Hs.5920
 
|nearest_unigene=Hs.5920
|num_trans=11
+
|num_trans=10020
 
|species=human
 
|species=human
 
|start=36258402
 
|start=36258402

Latest revision as of 17:48, 19 July 2021

Basic information about the TSS


TSS ID:hg_100677.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36258402
End:36258409
Strand:-
TSS Score:1
Start of the center position in the TSS region:36258405
End of the center position in the TSS region:36258406



Gene and protein annotation


Transcript_name:BC121179
Distance:0
GeneID:10020
HGNC/MGI_ID:HGNC:23657
UniProt_ID:
Gene_name:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene_symbol:GNE
Gene_synonyms:Uae1
Gene_source:HGNC:23657



Transcript annotation


Transcript_name:BC121179
Distance:0
Num_trans:10020
All_trans:HGNC:23657



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NM_005476
Entrez ID:10020
Nearest Unigene:Hs.5920
Nearest Refseq:NM_005476
Nearest Ensembl:ENSG00000159921
Gene Name:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene Alias:DMRV|GLCNE|IBM2|NM|Uae1
Gene Description:glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
Gene Type:protein-coding
CpG%:0.155
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):