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Difference between revisions of "TSS:Hg 100687.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK024996:-16 KJ895667:-65 DQ895235:-66 EU176239:-66 AM392682:-154
+
|all_trans=HGNC:18052
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
 
|distance=-16
 
|distance=-16
|distance_to_tss=24330
+
|distance_to_tss=24300
 
|end=36375974
 
|end=36375974
 
|end_of_center_position=36375970
 
|end_of_center_position=36375970
Line 22: Line 22:
 
|nearest_refseq=NM_022781
 
|nearest_refseq=NM_022781
 
|nearest_unigene=Hs.333503
 
|nearest_unigene=Hs.333503
|num_trans=5
+
|num_trans=152006
 
|species=human
 
|species=human
 
|start=36375964
 
|start=36375964

Latest revision as of 17:48, 19 July 2021

Basic information about the TSS


TSS ID:hg_100687.1
Species:human
Chr:chr9
TSS Classification:no
Start:36375964
End:36375974
Strand:-
TSS Score:1
Start of the center position in the TSS region:36375969
End of the center position in the TSS region:36375970



Gene and protein annotation


Transcript_name:AK024996
Distance:-16
GeneID:152006
HGNC/MGI_ID:HGNC:18052
UniProt_ID:
Gene_name:ring finger protein 38
Gene_symbol:RNF38
Gene_synonyms:
Gene_source:HGNC:18052



Transcript annotation


Transcript_name:AK024996
Distance:-16
Num_trans:152006
All_trans:HGNC:18052



TATA-Box annotation


Distance to TSS:24300
Nearest PromoterID:NM_022781
Entrez ID:152006
Nearest Unigene:Hs.333503
Nearest Refseq:NM_022781
Nearest Ensembl:ENSG00000137075
Gene Name:ring finger protein 38
Gene Alias:-
Gene Description:ring finger protein 38
Gene Type:protein-coding
CpG%:0.02
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):