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Difference between revisions of "TSS:Mm 9929.1"

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Line 3: Line 3:
 
|KMT3C=
 
|KMT3C=
 
|Zmynd14=
 
|Zmynd14=
|all_trans=AK178146:-241
+
|all_trans=MGI:1915889
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.015
 
|cpg_percent=0.015
 
|distance=-241
 
|distance=-241
|distance_to_tss=22646
+
|distance_to_tss=22649
 
|end=189899653
 
|end=189899653
 
|end_of_center_position=189899643
 
|end_of_center_position=189899643
 
|entrez_id=226830
 
|entrez_id=226830
 
|gc_percent=0.462687
 
|gc_percent=0.462687
|gene_alias=1110020E07Rik
+
|gene_alias=1110020E07Rik{{!}}4930402C15{{!}}KMT3C{{!}}Zmynd14
 
|gene_description=SET and MYND domain containing 2
 
|gene_description=SET and MYND domain containing 2
 
|gene_id=226830
 
|gene_id=226830
Line 25: Line 25:
 
|nearest_refseq=NM_026796
 
|nearest_refseq=NM_026796
 
|nearest_unigene=Mm.156895
 
|nearest_unigene=Mm.156895
|num_trans=1
+
|num_trans=226830
 
|species=mouse
 
|species=mouse
 
|start=189899631
 
|start=189899631

Latest revision as of 19:23, 28 July 2021

Basic information about the TSS


TSS ID:mm_9929.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:189899631
End:189899653
Strand:-
TSS Score:1
Start of the center position in the TSS region:189899642
End of the center position in the TSS region:189899643



Gene and protein annotation


Transcript_name:AK178146
Distance:-241
GeneID:226830
HGNC/MGI_ID:MGI:1915889
UniProt_ID:
Gene_name:SET and MYND domain containing 2
Gene_symbol:Smyd2
Gene_synonyms:1110020E07Rik KMT3C Zmynd14
Gene_source:MGI:1915889



Transcript annotation


Transcript_name:AK178146
Distance:-241
Num_trans:226830
All_trans:MGI:1915889



TATA-Box annotation


Distance to TSS:22649
Nearest PromoterID:NM_026796
Entrez ID:226830
Nearest Unigene:Mm.156895
Nearest Refseq:NM_026796
Nearest Ensembl:ENSMUSG00000026603
Gene Name:SET and MYND domain containing 2
Gene Alias:1110020E07Rik|4930402C15|KMT3C|Zmynd14
Gene Description:SET and MYND domain containing 2
Gene Type:protein-coding
CpG%:0.015
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):