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Difference between revisions of "TSS:Mm 9951.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000192306.1:0 AK045261:0 BC024141:0 AK163193:0 ENSMUST00000166139.6:-64 NR_027352:-64 uc007ebs.2:-64 AK078596:-64 ENSMUST00000047409.8:194 NM_144879:198 uc007ebr.2:198 AK140989:205
+
|all_trans=MGI:2444826
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_144879
 
|nearest_refseq=NM_144879
 
|nearest_unigene=Mm.22856
 
|nearest_unigene=Mm.22856
|num_trans=12
+
|num_trans=226841
 
|species=mouse
 
|species=mouse
 
|start=190979195
 
|start=190979195

Latest revision as of 19:27, 28 July 2021

Basic information about the TSS


TSS ID:mm_9951.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:190979195
End:190979232
Strand:-
TSS Score:1
Start of the center position in the TSS region:190979213
End of the center position in the TSS region:190979214



Gene and protein annotation


Transcript_name:ENSMUST00000192306.1 AK045261 BC024141 AK163193
Distance:0
GeneID:226841
HGNC/MGI_ID:MGI:2444826
UniProt_ID:
Gene_name:vasohibin 2
Gene_symbol:Vash2
Gene_synonyms:B130052G07Rik
Gene_source:MGI:2444826



Transcript annotation


Transcript_name:ENSMUST00000192306.1 AK045261 BC024141 AK163193
Distance:0
Num_trans:226841
All_trans:MGI:2444826



TATA-Box annotation


Distance to TSS:82
Nearest PromoterID:NR_027352
Entrez ID:226841
Nearest Unigene:Mm.22856
Nearest Refseq:NM_144879
Nearest Ensembl:ENSMUSG00000037568
Gene Name:vasohibin 2
Gene Alias:B130052G07Rik
Gene Description:vasohibin 2
Gene Type:protein-coding
CpG%:0.09
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):