Difference between revisions of "TSS:Hg 100796.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28537 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
|end=68540884 | |end=68540884 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153237 | |nearest_refseq=NM_153237 | ||
|nearest_unigene=Hs.663056 | |nearest_unigene=Hs.663056 | ||
| − | |num_trans= | + | |num_trans=169693 |
|species=human | |species=human | ||
|start=68540879 | |start=68540879 | ||
|start_of_center_position=68540881 | |start_of_center_position=68540881 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) |
| − | |transcript_name=ENST00000377311 | + | |transcript_name=ENST00000377311.4 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100796.1 | |tss_id=hg_100796.1 | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 68540881 |
|---|---|
| End of the center position in the TSS region: | 68540882 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377311.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 169693 |
| All_trans: | HGNC:28537 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_153237 |
| Entrez ID: | 169693 |
| Nearest Unigene: | Hs.663056 |
| Nearest Refseq: | NM_153237 |
| Nearest Ensembl: | ENSG00000181778 |
| Gene Name: | transmembrane protein 252 |
| Gene Alias: | C9orf71 |
| Gene Description: | transmembrane protein 252 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) |
