Difference between revisions of "TSS:Hg 100939.1"
From referenceTSS
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|CGI-67= | |CGI-67= | ||
|FAM108B1= | |FAM108B1= | ||
| − | |all_trans=NM_016014:-5 | + | |all_trans=LP896547:0 LF385282:0 MA620859:0 NM_016014:-5 AK293060:-5 ENST00000333421.7:33 NM_001025780:33 BC044576:33 ENST00000377041.6:295 AF151825:321 BC038390:484 GQ900982:484 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=12 | |distance_to_tss=12 | ||
|end=71911240 | |end=71911240 | ||
| Line 11: | Line 11: | ||
|entrez_id=51104 | |entrez_id=51104 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=C9orf77 | + | |gene_alias=C9orf77{{!}}CGI-67{{!}}FAM108B1 |
|gene_description=abhydrolase domain containing 17B | |gene_description=abhydrolase domain containing 17B | ||
|gene_id=51104 | |gene_id=51104 | ||
| − | |gene_name= | + | |gene_name=ABHD17B |
|gene_source=HGNC:24278 | |gene_source=HGNC:24278 | ||
|gene_symbol=ABHD17B | |gene_symbol=ABHD17B | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:24278 | |hgnc_mgi_id=HGNC:24278 | ||
|nearest_ensembl=ENSG00000107362 | |nearest_ensembl=ENSG00000107362 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016014 |
|nearest_refseq=NM_016014 | |nearest_refseq=NM_016014 | ||
|nearest_unigene=Hs.380389 | |nearest_unigene=Hs.380389 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=71911225 | |start=71911225 | ||
|start_of_center_position=71911232 | |start_of_center_position=71911232 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LP896547 LF385282 MA620859 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100939.1 | |tss_id=hg_100939.1 | ||
Latest revision as of 16:28, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 71911232 |
|---|---|
| End of the center position in the TSS region: | 71911233 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LP896547 LF385282 MA620859 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | LP896547:0 LF385282:0 MA620859:0 NM_016014:-5 AK293060:-5 ENST00000333421.7:33 NM_001025780:33 BC044576:33 ENST00000377041.6:295 AF151825:321 BC038390:484 GQ900982:484 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NM_016014 |
| Entrez ID: | 51104 |
| Nearest Unigene: | Hs.380389 |
| Nearest Refseq: | NM_016014 |
| Nearest Ensembl: | ENSG00000107362 |
| Gene Name: | ABHD17B |
| Gene Alias: | C9orf77|CGI-67|FAM108B1 |
| Gene Description: | abhydrolase domain containing 17B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
