Difference between revisions of "TSS:Hg 5104.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|KIAA0460= | |KIAA0460= | ||
| − | |all_trans= | + | |all_trans=HGNC:29039 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 10: | Line 10: | ||
|entrez_id=23248 | |entrez_id=23248 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=HSPC099 | + | |gene_alias=HSPC099{{!}}KIAA0460 |
|gene_description=regulation of nuclear pre-mRNA domain containing 2 | |gene_description=regulation of nuclear pre-mRNA domain containing 2 | ||
|gene_id=23248 | |gene_id=23248 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29039 | |hgnc_mgi_id=HGNC:29039 | ||
|nearest_ensembl=ENSG00000163125 | |nearest_ensembl=ENSG00000163125 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001297673 |
|nearest_refseq=NM_015203 | |nearest_refseq=NM_015203 | ||
|nearest_unigene=Hs.213666 | |nearest_unigene=Hs.213666 | ||
| − | |num_trans= | + | |num_trans=23248 |
|species=human | |species=human | ||
|start=150364668 | |start=150364668 | ||
|start_of_center_position=150364693 | |start_of_center_position=150364693 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000369067.7 ENST00000369068 | + | |transcript_name=ENST00000369067.7 ENST00000369068.4 AK304380 AK291703 AK308148 AK056707 AF161362 BC045623 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_5104.1 | |tss_id=hg_5104.1 | ||
Latest revision as of 01:01, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 150364693 |
|---|---|
| End of the center position in the TSS region: | 150364694 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000369067.7 ENST00000369068.4 AK304380 AK291703 AK308148 AK056707 AF161362 BC045623 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23248 |
| All_trans: | HGNC:29039 |
TATA-Box annotation
| Distance to TSS: | 582 |
|---|---|
| Nearest PromoterID: | NM_001297673 |
| Entrez ID: | 23248 |
| Nearest Unigene: | Hs.213666 |
| Nearest Refseq: | NM_015203 |
| Nearest Ensembl: | ENSG00000163125 |
| Gene Name: | regulation of nuclear pre-mRNA domain containing 2 |
| Gene Alias: | HSPC099|KIAA0460 |
| Gene Description: | regulation of nuclear pre-mRNA domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
