Difference between revisions of "TSS:Mm 170516.1"
From referenceTSS
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| − | {{ | + | {{TSSDetail |
| + | |Btdc= | ||
| + | |F730015O22Rik= | ||
| + | |PD-L2= | ||
|all_trans= | |all_trans= | ||
| − | |||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=53840 | |distance_to_tss=53840 | ||
| − | |end= | + | |end=29464762 |
| + | |end_of_center_position=29464760 | ||
|entrez_id=58205 | |entrez_id=58205 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=B7-DC | + | |gene_alias=B7-DC{{!}}Btdc{{!}}F730015O22Rik{{!}}PD-L2 |
|gene_description=programmed cell death 1 ligand 2 | |gene_description=programmed cell death 1 ligand 2 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=Pdcd1lg2 |
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
| Line 22: | Line 25: | ||
|nearest_refseq=NM_021396 | |nearest_refseq=NM_021396 | ||
|nearest_unigene=Mm.116737 | |nearest_unigene=Mm.116737 | ||
| − | |num_trans= | + | |num_trans=0 |
| + | |peakPage= | ||
|peak_id=mm_170516.1 | |peak_id=mm_170516.1 | ||
|peak_score=1 | |peak_score=1 | ||
| − | |start= | + | |species=mouse |
| − | |strand= | + | |start=29464756 |
| − | |tata_box= | + | |start_of_center_position=29464759 |
| + | |strand=- | ||
| + | |tata_box=-38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
| + | |tss_classification=no | ||
| + | |tss_id=mm_170516.1 | ||
| + | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:27, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 29464759 |
|---|---|
| End of the center position in the TSS region: | 29464760 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 53840 |
|---|---|
| Nearest PromoterID: | NM_021396 |
| Entrez ID: | 58205 |
| Nearest Unigene: | Mm.116737 |
| Nearest Refseq: | NM_021396 |
| Nearest Ensembl: | ENSMUSG00000016498 |
| Gene Name: | Pdcd1lg2 |
| Gene Alias: | B7-DC|Btdc|F730015O22Rik|PD-L2 |
| Gene Description: | programmed cell death 1 ligand 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00) |
