Difference between revisions of "TSS:Hg 101327.1"
From referenceTSS
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|M-sema-G= | |M-sema-G= | ||
|SEMAJ= | |SEMAJ= | ||
| − | |all_trans= | + | |all_trans=HGNC:10732 |
|chr=chr9 | |chr=chr9 | ||
|coll-4= | |coll-4= | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=43308 |
|end=89436588 | |end=89436588 | ||
|end_of_center_position=89436582 | |end_of_center_position=89436582 | ||
| − | |entrez_id= | + | |entrez_id=NA |
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias= | + | |gene_alias= |
| − | |gene_description= | + | |gene_description= |
|gene_id=10507 | |gene_id=10507 | ||
|gene_name=semaphorin 4D | |gene_name=semaphorin 4D | ||
| Line 20: | Line 20: | ||
|gene_symbol=SEMA4D | |gene_symbol=SEMA4D | ||
|gene_synonyms=CD100 FLJ39737 coll-4 | |gene_synonyms=CD100 FLJ39737 coll-4 | ||
| − | |gene_type= | + | |gene_type= |
|hgnc_mgi_id=HGNC:10732 | |hgnc_mgi_id=HGNC:10732 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_163885 |
| − | |nearest_refseq= | + | |nearest_refseq= |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=10507 |
|species=human | |species=human | ||
|start=89436575 | |start=89436575 | ||
|start_of_center_position=89436581 | |start_of_center_position=89436581 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-35(CTGTTTAAAAGG,-,0.00) |
| − | |transcript_name=ENST00000482128 | + | |transcript_name=ENST00000482128.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101327.1 | |tss_id=hg_101327.1 | ||
Latest revision as of 18:02, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89436581 |
|---|---|
| End of the center position in the TSS region: | 89436582 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000482128.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10507 |
| All_trans: | HGNC:10732 |
TATA-Box annotation
| Distance to TSS: | 43308 |
|---|---|
| Nearest PromoterID: | NR_163885 |
| Entrez ID: | NA |
| Nearest Unigene: | |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | semaphorin 4D |
| Gene Alias: | |
| Gene Description: | |
| Gene Type: | |
| CpG%: | 0.03 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTGTTTAAAAGG,-,0.00) |
