Difference between revisions of "TSS:Hg 101401.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-2265 |
|end=91952499 | |end=91952499 | ||
|end_of_center_position=91952494 | |end_of_center_position=91952494 | ||
|entrez_id=4920 | |entrez_id=4920 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=BDB | + | |gene_alias=BDB{{!}}BDB1{{!}}NTRKR2 |
|gene_description=receptor tyrosine kinase like orphan receptor 2 | |gene_description=receptor tyrosine kinase like orphan receptor 2 | ||
|gene_name=ROR2 | |gene_name=ROR2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000169071 | |nearest_ensembl=ENSG00000169071 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004560 |
|nearest_refseq=NM_004560 | |nearest_refseq=NM_004560 | ||
|nearest_unigene=Hs.98255 | |nearest_unigene=Hs.98255 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=91952493 | |start_of_center_position=91952493 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-36(GGCTATAAAAGA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91952493 |
|---|---|
| End of the center position in the TSS region: | 91952494 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2265 |
|---|---|
| Nearest PromoterID: | NM_004560 |
| Entrez ID: | 4920 |
| Nearest Unigene: | Hs.98255 |
| Nearest Refseq: | NM_004560 |
| Nearest Ensembl: | ENSG00000169071 |
| Gene Name: | ROR2 |
| Gene Alias: | BDB|BDB1|NTRKR2 |
| Gene Description: | receptor tyrosine kinase like orphan receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GGCTATAAAAGA,-,0.00) |
