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Difference between revisions of "TSS:Mm 37279.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000155069.1:-81 uc008ulc.1:-81 AK142602:-81
+
|all_trans=MGI:3651212
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 9: Line 9:
 
|entrez_id=100038571
 
|entrez_id=100038571
 
|gc_percent=0.462687
 
|gc_percent=0.462687
|gene_alias=OTTMUSG00000008822
+
|gene_alias=-
 
|gene_description=predicted gene 12863
 
|gene_description=predicted gene 12863
 
|gene_id=100038571
 
|gene_id=100038571
Line 22: Line 22:
 
|nearest_refseq=NR_137285
 
|nearest_refseq=NR_137285
 
|nearest_unigene=Mm.426714
 
|nearest_unigene=Mm.426714
|num_trans=3
+
|num_trans=100038571
 
|species=mouse
 
|species=mouse
 
|start=118954824
 
|start=118954824
 
|start_of_center_position=118954831
 
|start_of_center_position=118954831
 
|strand=-
 
|strand=-
|transcript_name=ENSMUST00000155069.1 uc008ulc.1 AK142602
+
|transcript_name=ENSMUST00000155069.1 AK142602
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_37279.1
 
|tss_id=mm_37279.1

Latest revision as of 20:38, 27 July 2021

Basic information about the TSS


TSS ID:mm_37279.1
Species:mouse
Chr:chr4
TSS Classification:yes
Start:118954824
End:118954838
Strand:-
TSS Score:1
Start of the center position in the TSS region:118954831
End of the center position in the TSS region:118954832



Gene and protein annotation


Transcript_name:ENSMUST00000155069.1 AK142602
Distance:-81
GeneID:100038571
HGNC/MGI_ID:MGI:3651212
UniProt_ID:Q3UQB6
Gene_name:predicted gene 12863
Gene_symbol:Gm12863
Gene_synonyms:
Gene_source:MGI:3651212



Transcript annotation


Transcript_name:ENSMUST00000155069.1 AK142602
Distance:-81
Num_trans:100038571
All_trans:MGI:3651212



TATA-Box annotation


Distance to TSS:88
Nearest PromoterID:NR_137285
Entrez ID:100038571
Nearest Unigene:Mm.426714
Nearest Refseq:NR_137285
Nearest Ensembl:ENSMUSG00000073765
Gene Name:predicted gene 12863
Gene Alias:-
Gene Description:predicted gene 12863
Gene Type:ncRNA
CpG%:0.015
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):