Difference between revisions of "TSS:Hg 219835.1"
From referenceTSS
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|PKDR1= | |PKDR1= | ||
|SAMD6= | |SAMD6= | ||
| − | |all_trans= | + | |all_trans=HGNC:26724 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-23 | |distance=-23 | ||
| − | |distance_to_tss= | + | |distance_to_tss=19152 |
|end=98777403 | |end=98777403 | ||
|end_of_center_position=98777403 | |end_of_center_position=98777403 | ||
|entrez_id=203286 | |entrez_id=203286 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=ANKRD14 | + | |gene_alias=ANKRD14{{!}}NPHP16{{!}}PKDR1{{!}}SAMD6 |
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | |gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | ||
|gene_id=203286 | |gene_id=203286 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_173551 | |nearest_refseq=NM_173551 | ||
|nearest_unigene=Hs.406890 | |nearest_unigene=Hs.406890 | ||
| − | |num_trans= | + | |num_trans=203286 |
|species=human | |species=human | ||
|start=98777402 | |start=98777402 | ||
|start_of_center_position=98777402 | |start_of_center_position=98777402 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000444472.5 | + | |transcript_name=ENST00000444472.5 AK094247 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219835.1 | |tss_id=hg_219835.1 | ||
Latest revision as of 07:22, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 98777402 |
|---|---|
| End of the center position in the TSS region: | 98777403 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000444472.5 AK094247 |
|---|---|
| Distance: | -23 |
| Num_trans: | 203286 |
| All_trans: | HGNC:26724 |
TATA-Box annotation
| Distance to TSS: | 19152 |
|---|---|
| Nearest PromoterID: | NM_173551 |
| Entrez ID: | 203286 |
| Nearest Unigene: | Hs.406890 |
| Nearest Refseq: | NM_173551 |
| Nearest Ensembl: | ENSG00000165138 |
| Gene Name: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Alias: | ANKRD14|NPHP16|PKDR1|SAMD6 |
| Gene Description: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
