Difference between revisions of "TSS:Hg 101866.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|IKI3= | |IKI3= | ||
|TOT1= | |TOT1= | ||
| − | |all_trans= | + | |all_trans=HGNC:5959 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance=- | + | |distance=-5 |
| − | |distance_to_tss= | + | |distance_to_tss=191 |
|end=108933938 | |end=108933938 | ||
|end_of_center_position=108933933 | |end_of_center_position=108933933 | ||
|entrez_id=8518 | |entrez_id=8518 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=DYS | + | |gene_alias=DYS{{!}}FD{{!}}IKAP{{!}}IKBKAP{{!}}IKI3{{!}}TOT1 |
| − | |gene_description= | + | |gene_description=elongator complex protein 1 |
|gene_id=8518 | |gene_id=8518 | ||
| − | |gene_name= | + | |gene_name=elongator acetyltransferase complex subunit 1 |
|gene_source=HGNC:5959 | |gene_source=HGNC:5959 | ||
| − | |gene_symbol= | + | |gene_symbol=ELP1 |
| − | |gene_synonyms= | + | |gene_synonyms=IKAP IKI3 TOT1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5959 | |hgnc_mgi_id=HGNC:5959 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_003640 | |nearest_refseq=NM_003640 | ||
|nearest_unigene=Hs.494738 | |nearest_unigene=Hs.494738 | ||
| − | |num_trans= | + | |num_trans=8518 |
|species=human | |species=human | ||
|start=108933927 | |start=108933927 | ||
|start_of_center_position=108933932 | |start_of_center_position=108933932 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000676416.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101866.1 | |tss_id=hg_101866.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:14, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 108933932 |
|---|---|
| End of the center position in the TSS region: | 108933933 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000676416.1 |
|---|---|
| Distance: | -5 |
| Num_trans: | 8518 |
| All_trans: | HGNC:5959 |
TATA-Box annotation
| Distance to TSS: | 191 |
|---|---|
| Nearest PromoterID: | NM_003640 |
| Entrez ID: | 8518 |
| Nearest Unigene: | Hs.494738 |
| Nearest Refseq: | NM_003640 |
| Nearest Ensembl: | ENSG00000070061 |
| Gene Name: | elongator acetyltransferase complex subunit 1 |
| Gene Alias: | DYS|FD|IKAP|IKBKAP|IKI3|TOT1 |
| Gene Description: | elongator complex protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
