Difference between revisions of "TSS:Hg 102014.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000338205.9:-72 | + | |all_trans=LF354975:-69 MA590552:-69 ENST00000338205.9:-72 NM_001364929:-98 NM_001363756:-98 ENST00000602978.1:218 AK122712:248 ENST00000259335.8:-460 LF383872:-460 MA619449:-460 BC172431:-461 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance=- | + | |distance=-69 |
| − | |distance_to_tss= | + | |distance_to_tss=103 |
|end=111484285 | |end=111484285 | ||
|end_of_center_position=111484280 | |end_of_center_position=111484280 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
|gene_id=23392 | |gene_id=23392 | ||
| − | |gene_name= | + | |gene_name=ECPAS |
|gene_source=HGNC:29020 | |gene_source=HGNC:29020 | ||
|gene_symbol=KIAA0368 | |gene_symbol=KIAA0368 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:29020 | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363756 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=111484274 | |start=111484274 | ||
|start_of_center_position=111484279 | |start_of_center_position=111484279 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF354975 MA590552 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102014.1 | |tss_id=hg_102014.1 | ||
Latest revision as of 16:53, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 111484279 |
|---|---|
| End of the center position in the TSS region: | 111484280 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354975 MA590552 |
|---|---|
| Distance: | -69 |
| Num_trans: | 11 |
| All_trans: | LF354975:-69 MA590552:-69 ENST00000338205.9:-72 NM_001364929:-98 NM_001363756:-98 ENST00000602978.1:218 AK122712:248 ENST00000259335.8:-460 LF383872:-460 MA619449:-460 BC172431:-461 |
TATA-Box annotation
| Distance to TSS: | 103 |
|---|---|
| Nearest PromoterID: | NM_001363756 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | ECPAS |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
