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Difference between revisions of "TSS:Hg 102279.1"

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{{TSSDetail
 
{{TSSDetail
 
|MIRN147=
 
|MIRN147=
|all_trans=AF087969:160 ENST00000433194.6:-253 uc064vim.1:-253 ENST00000480467.5:-296 uc064vin.1:-296 ENST00000484546.1:-463 uc064vio.1:-463
+
|all_trans=HGNC:18672
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 10: Line 10:
 
|entrez_id=406939
 
|entrez_id=406939
 
|gc_percent=0.502488
 
|gc_percent=0.502488
|gene_alias=MIR147
+
|gene_alias=MIR147{{!}}MIRN147{{!}}hsa-mir-147a
 
|gene_description=microRNA 147a
 
|gene_description=microRNA 147a
 
|gene_id=55755
 
|gene_id=55755
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|nearest_refseq=NR_029604
 
|nearest_refseq=NR_029604
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=7
+
|num_trans=55755
 
|species=human
 
|species=human
 
|start=120403175
 
|start=120403175

Latest revision as of 18:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_102279.1
Species:human
Chr:chr9
TSS Classification:no
Start:120403175
End:120403199
Strand:-
TSS Score:1
Start of the center position in the TSS region:120403187
End of the center position in the TSS region:120403188



Gene and protein annotation


Transcript_name:AF087969
Distance:160
GeneID:55755
HGNC/MGI_ID:HGNC:18672
UniProt_ID:
Gene_name:CDK5 regulatory subunit associated protein 2
Gene_symbol:CDK5RAP2
Gene_synonyms:C48 CEP215 FLJ10867
Gene_source:HGNC:18672



Transcript annotation


Transcript_name:AF087969
Distance:160
Num_trans:55755
All_trans:HGNC:18672



TATA-Box annotation


Distance to TSS:-158137
Nearest PromoterID:NR_029604
Entrez ID:406939
Nearest Unigene:
Nearest Refseq:NR_029604
Nearest Ensembl:ENSG00000207814
Gene Name:CDK5 regulatory subunit associated protein 2
Gene Alias:MIR147|MIRN147|hsa-mir-147a
Gene Description:microRNA 147a
Gene Type:ncRNA
CpG%:0.02
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):