Difference between revisions of "TSS:Hg 102313.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|PCL3= | |PCL3= | ||
|TDRD19B= | |TDRD19B= | ||
| − | |all_trans= | + | |all_trans=HGNC:24566 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=34 |
| − | |distance_to_tss=- | + | |distance_to_tss=-148 |
|end=120877349 | |end=120877349 | ||
|end_of_center_position=120877336 | |end_of_center_position=120877336 | ||
|entrez_id=26147 | |entrez_id=26147 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=MTF2L1 | + | |gene_alias=MTF2L1{{!}}PCL3{{!}}TDRD19B |
|gene_description=PHD finger protein 19 | |gene_description=PHD finger protein 19 | ||
|gene_id=26147 | |gene_id=26147 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_015651 | |nearest_refseq=NM_015651 | ||
|nearest_unigene=Hs.460124 | |nearest_unigene=Hs.460124 | ||
| − | |num_trans= | + | |num_trans=26147 |
|species=human | |species=human | ||
|start=120877322 | |start=120877322 | ||
|start_of_center_position=120877335 | |start_of_center_position=120877335 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC108663 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102313.1 | |tss_id=hg_102313.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:24, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120877335 |
|---|---|
| End of the center position in the TSS region: | 120877336 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC108663 |
|---|---|
| Distance: | 34 |
| Num_trans: | 26147 |
| All_trans: | HGNC:24566 |
TATA-Box annotation
| Distance to TSS: | -148 |
|---|---|
| Nearest PromoterID: | NM_015651 |
| Entrez ID: | 26147 |
| Nearest Unigene: | Hs.460124 |
| Nearest Refseq: | NM_015651 |
| Nearest Ensembl: | ENSG00000119403 |
| Gene Name: | PHD finger protein 19 |
| Gene Alias: | MTF2L1|PCL3|TDRD19B |
| Gene Description: | PHD finger protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
