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Difference between revisions of "TSS:Hg 102342.1"

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{{TSSDetail
 
{{TSSDetail
 
|RAB-14=
 
|RAB-14=
|all_trans=AL162081:3 BC006081:-27 BC013057:-28 ENST00000373840.8:-38 uc004blc.4:-38 AK023524:-38 AK090889:-55 AF112206:115 NM_016322:-256
+
|all_trans=HGNC:16524
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.085
 
|cpg_percent=0.085
 
|distance=3
 
|distance=3
|distance_to_tss=266
+
|distance_to_tss=48
 
|end=121201831
 
|end=121201831
 
|end_of_center_position=121201821
 
|end_of_center_position=121201821
 
|entrez_id=51552
 
|entrez_id=51552
 
|gc_percent=0.686567
 
|gc_percent=0.686567
|gene_alias=FBP
+
|gene_alias=FBP{{!}}RAB-14
|gene_description="RAB14, member RAS oncogene family"
+
|gene_description=RAB14, member RAS oncogene family
 
|gene_id=51552
 
|gene_id=51552
|gene_name="RAB14, member RAS oncogene family"
+
|gene_name=RAB14, member RAS oncogene family
 
|gene_source=HGNC:16524
 
|gene_source=HGNC:16524
 
|gene_symbol=RAB14
 
|gene_symbol=RAB14
Line 23: Line 23:
 
|nearest_refseq=NM_016322
 
|nearest_refseq=NM_016322
 
|nearest_unigene=Hs.371563
 
|nearest_unigene=Hs.371563
|num_trans=9
+
|num_trans=51552
 
|species=human
 
|species=human
 
|start=121201810
 
|start=121201810

Latest revision as of 18:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_102342.1
Species:human
Chr:chr9
TSS Classification:yes
Start:121201810
End:121201831
Strand:-
TSS Score:1
Start of the center position in the TSS region:121201820
End of the center position in the TSS region:121201821



Gene and protein annotation


Transcript_name:AL162081
Distance:3
GeneID:51552
HGNC/MGI_ID:HGNC:16524
UniProt_ID:
Gene_name:RAB14, member RAS oncogene family
Gene_symbol:RAB14
Gene_synonyms:FBP RAB-14
Gene_source:HGNC:16524



Transcript annotation


Transcript_name:AL162081
Distance:3
Num_trans:51552
All_trans:HGNC:16524



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NM_016322
Entrez ID:51552
Nearest Unigene:Hs.371563
Nearest Refseq:NM_016322
Nearest Ensembl:ENSG00000119396
Gene Name:RAB14, member RAS oncogene family
Gene Alias:FBP|RAB-14
Gene Description:RAB14, member RAS oncogene family
Gene Type:protein-coding
CpG%:0.085
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):