Difference between revisions of "TSS:Hg 102383.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:21735 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014368 | |nearest_refseq=NM_014368 | ||
|nearest_unigene=Hs.103137 | |nearest_unigene=Hs.103137 | ||
| − | |num_trans= | + | |num_trans=26468 |
|species=human | |species=human | ||
|start=122213661 | |start=122213661 | ||
|start_of_center_position=122213668 | |start_of_center_position=122213668 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-87(CGTCATAAAAAG,-,0.00) |
| − | |transcript_name=ENST00000482062 | + | |transcript_name=ENST00000482062.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102383.1 | |tss_id=hg_102383.1 | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 122213668 |
|---|---|
| End of the center position in the TSS region: | 122213669 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000482062.1 |
|---|---|
| Distance: | -217 |
| Num_trans: | 26468 |
| All_trans: | HGNC:21735 |
TATA-Box annotation
| Distance to TSS: | 8071 |
|---|---|
| Nearest PromoterID: | NM_001242335 |
| Entrez ID: | 26468 |
| Nearest Unigene: | Hs.103137 |
| Nearest Refseq: | NM_014368 |
| Nearest Ensembl: | ENSG00000106852 |
| Gene Name: | LIM homeobox 6 |
| Gene Alias: | LHX6.1 |
| Gene Description: | LIM homeobox 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -87(CGTCATAAAAAG,-,0.00) |
