Personal tools

Difference between revisions of "TSS:Hg 102456.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000348462.5:0 ENST00000629845.1:0 NM_007209:0 uc004boy.2:0 uc064vqn.1:0 BC000348:0 AK291072:0 BC010919:0 D28448:0 ENST00000487431.1:6 uc064vqm.1:6 ENST00000493018.5:7 uc064vql.1:7 ENST00000495728.1:-11 uc064vqo.1:-11 U12465:14 BC071915:15 ENST00000373570.8:27 uc064vqk.1:27 BC094828:386 CU674168:386 KJ893256:386 KJ898381:386 DQ891363:386 DQ894543:386 CR456877:386
+
|all_trans=HGNC:10344
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
 
|distance=0
 
|distance=0
|distance_to_tss=5
+
|distance_to_tss=1
 
|end=124861970
 
|end=124861970
 
|end_of_center_position=124861956
 
|end_of_center_position=124861956
 
|entrez_id=11224
 
|entrez_id=11224
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=L35
+
|gene_alias=DBA19{{!}}L35
 
|gene_description=ribosomal protein L35
 
|gene_description=ribosomal protein L35
 
|gene_id=11224
 
|gene_id=11224
Line 22: Line 22:
 
|nearest_refseq=NM_007209
 
|nearest_refseq=NM_007209
 
|nearest_unigene=Hs.182825
 
|nearest_unigene=Hs.182825
|num_trans=26
+
|num_trans=11224
 
|species=human
 
|species=human
 
|start=124861941
 
|start=124861941
 
|start_of_center_position=124861955
 
|start_of_center_position=124861955
 
|strand=-
 
|strand=-
|transcript_name=ENST00000348462.5 ENST00000629845.1 NM_007209 uc004boy.2 uc064vqn.1 BC000348 AK291072 BC010919 D28448
+
|transcript_name=ENST00000348462.6 ENST00000629845.1 BC000348 AK291072 BC010919 D28448
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102456.1
 
|tss_id=hg_102456.1

Latest revision as of 18:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_102456.1
Species:human
Chr:chr9
TSS Classification:yes
Start:124861941
End:124861970
Strand:-
TSS Score:1
Start of the center position in the TSS region:124861955
End of the center position in the TSS region:124861956



Gene and protein annotation


Transcript_name:ENST00000348462.6 ENST00000629845.1 BC000348 AK291072 BC010919 D28448
Distance:0
GeneID:11224
HGNC/MGI_ID:HGNC:10344
UniProt_ID:F2Z388 P42766
Gene_name:ribosomal protein L35
Gene_symbol:RPL35
Gene_synonyms:L35
Gene_source:HGNC:10344



Transcript annotation


Transcript_name:ENST00000348462.6 ENST00000629845.1 BC000348 AK291072 BC010919 D28448
Distance:0
Num_trans:11224
All_trans:HGNC:10344



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_007209
Entrez ID:11224
Nearest Unigene:Hs.182825
Nearest Refseq:NM_007209
Nearest Ensembl:ENSG00000136942
Gene Name:ribosomal protein L35
Gene Alias:DBA19|L35
Gene Description:ribosomal protein L35
Gene Type:protein-coding
CpG%:0.125
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):