Difference between revisions of "TSS:Hg 10657.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ905706:0 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=27199 | ||
| + | |end=19339563 | ||
| + | |end_of_center_position=19339526 | ||
|entrez_id=54896 | |entrez_id=54896 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=- | + | |gene_alias=LAAT-1{{!}}LAAT1{{!}}PQLC2 |
| − | |gene_description= | + | |gene_description=solute carrier family 66 member 1 |
| − | |gene_name= | + | |gene_name=SLC66A1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000040487 | |nearest_ensembl=ENSG00000040487 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_109848 |
|nearest_refseq=NM_017765 | |nearest_refseq=NM_017765 | ||
|nearest_unigene=Hs.647620 | |nearest_unigene=Hs.647620 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=19339487 | ||
| + | |start_of_center_position=19339525 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ905706 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10657.1 | |tss_id=hg_10657.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:40, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19339525 |
|---|---|
| End of the center position in the TSS region: | 19339526 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ905706 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | KJ905706:0 |
TATA-Box annotation
| Distance to TSS: | 27199 |
|---|---|
| Nearest PromoterID: | NR_109848 |
| Entrez ID: | 54896 |
| Nearest Unigene: | Hs.647620 |
| Nearest Refseq: | NM_017765 |
| Nearest Ensembl: | ENSG00000040487 |
| Gene Name: | SLC66A1 |
| Gene Alias: | LAAT-1|LAAT1|PQLC2 |
| Gene Description: | solute carrier family 66 member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
