Difference between revisions of "TSS:Hg 243140.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Unc5h4= | |Unc5h4= | ||
| − | |all_trans= | + | |all_trans=HGNC:17069 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=24 |
|distance_to_tss=-18622 | |distance_to_tss=-18622 | ||
| − | |end= | + | |end=129994963 |
|end_of_center_position=129994961 | |end_of_center_position=129994961 | ||
|entrez_id=137970 | |entrez_id=137970 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=PRO34692 | + | |gene_alias=PRO34692{{!}}Unc5h4 |
|gene_description=unc-5 netrin receptor D | |gene_description=unc-5 netrin receptor D | ||
| − | |gene_id= | + | |gene_id=23048 |
| − | |gene_name= | + | |gene_name=formin binding protein 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:17069 |
| − | |gene_symbol= | + | |gene_symbol=FNBP1 |
| − | |gene_synonyms= | + | |gene_synonyms=FBP17 KIAA0554 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:17069 |
|nearest_ensembl=ENSG00000156687 | |nearest_ensembl=ENSG00000156687 | ||
|nearest_promoter_id=NM_001322818 | |nearest_promoter_id=NM_001322818 | ||
|nearest_refseq=NM_080872 | |nearest_refseq=NM_080872 | ||
|nearest_unigene=Hs.238889 | |nearest_unigene=Hs.238889 | ||
| − | |num_trans= | + | |num_trans=23048 |
|species=human | |species=human | ||
| − | |start= | + | |start=129994958 |
|start_of_center_position=129994960 | |start_of_center_position=129994960 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000491905.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243140.1 | |tss_id=hg_243140.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 15:02, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129994960 |
|---|---|
| End of the center position in the TSS region: | 129994961 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000491905.1 |
|---|---|
| Distance: | 24 |
| Num_trans: | 23048 |
| All_trans: | HGNC:17069 |
TATA-Box annotation
| Distance to TSS: | -18622 |
|---|---|
| Nearest PromoterID: | NM_001322818 |
| Entrez ID: | 137970 |
| Nearest Unigene: | Hs.238889 |
| Nearest Refseq: | NM_080872 |
| Nearest Ensembl: | ENSG00000156687 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | PRO34692|Unc5h4 |
| Gene Description: | unc-5 netrin receptor D |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
