Difference between revisions of "TSS:Hg 146068.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000504245.5:0 ENST00000560341.2:0 NR_040062:0 NR_040061:0 NR_040059:0 NR_040060:0 uc001zks.3:0 uc021sjc.2:0 AK127696:0 |chr=chr15 |cpg_percent=0.0...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:48619 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-7 | |distance_to_tss=-7 | ||
|end=40039353 | |end=40039353 | ||
| + | |end_of_center_position=40039305 | ||
|entrez_id=100131089 | |entrez_id=100131089 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:48619 | |hgnc_mgi_id=HGNC:48619 | ||
|nearest_ensembl=ENSG00000248508 | |nearest_ensembl=ENSG00000248508 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_040059 |
|nearest_refseq=NR_040059 | |nearest_refseq=NR_040059 | ||
|nearest_unigene=Hs.386000 | |nearest_unigene=Hs.386000 | ||
| − | |num_trans= | + | |num_trans=100131089 |
|species=human | |species=human | ||
|start=40039255 | |start=40039255 | ||
| + | |start_of_center_position=40039304 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000504245. | + | |transcript_name=ENST00000655221.1 ENST00000667323.1 ENST00000504245.6 ENST00000661955.1 ENST00000660446.1 ENST00000668306.1 ENST00000560341.2 AK127696 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_146068.1 | |tss_id=hg_146068.1 | ||
Latest revision as of 10:15, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 40039304 |
|---|---|
| End of the center position in the TSS region: | 40039305 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000655221.1 ENST00000667323.1 ENST00000504245.6 ENST00000661955.1 ENST00000660446.1 ENST00000668306.1 ENST00000560341.2 AK127696 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100131089 |
| All_trans: | HGNC:48619 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NR_040059 |
| Entrez ID: | 100131089 |
| Nearest Unigene: | Hs.386000 |
| Nearest Refseq: | NR_040059 |
| Nearest Ensembl: | ENSG00000248508 |
| Gene Name: | SRP14 antisense RNA1 (head to head) |
| Gene Alias: | - |
| Gene Description: | SRP14 antisense RNA1 (head to head) |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
