Difference between revisions of "TSS:Hg 102944.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|RGF= | |RGF= | ||
|RalGEF= | |RalGEF= | ||
| − | |all_trans= | + | |all_trans=HGNC:9842 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=133121253 | |end=133121253 | ||
|end_of_center_position=133121242 | |end_of_center_position=133121242 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=RGDS | + | |gene_alias=RGDS{{!}}RGF{{!}}RalGEF |
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
|gene_id=5900 | |gene_id=5900 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| − | |num_trans= | + | |num_trans=5900 |
|species=human | |species=human | ||
|start=133121229 | |start=133121229 | ||
|start_of_center_position=133121241 | |start_of_center_position=133121241 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372050.8 BC059362 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102944.1 | |tss_id=hg_102944.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N4Y1 | + | |uniprot_id=Q12967 Q8N4Y1 |
}} | }} | ||
Latest revision as of 18:38, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133121241 |
|---|---|
| End of the center position in the TSS region: | 133121242 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000372050.8 BC059362 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5900 |
| All_trans: | HGNC:9842 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_006266 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS|RGF|RalGEF |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
