Difference between revisions of "TSS:Hg 103017.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TMEM226= | |TMEM226= | ||
| − | |all_trans= | + | |all_trans=HGNC:33778 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=133524965 | |end=133524965 | ||
|end_of_center_position=133524958 | |end_of_center_position=133524958 | ||
|entrez_id=389827 | |entrez_id=389827 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=MYOMAKER | + | |gene_alias=MYOMAKER{{!}}TMEM226{{!}}TMEM8C |
| − | |gene_description= | + | |gene_description=myomaker, myoblast fusion factor |
|gene_id=389827 | |gene_id=389827 | ||
| − | |gene_name= | + | |gene_name=myomaker, myoblast fusion factor |
|gene_source=HGNC:33778 | |gene_source=HGNC:33778 | ||
| − | |gene_symbol= | + | |gene_symbol=MYMK |
|gene_synonyms=TMEM226 | |gene_synonyms=TMEM226 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|nearest_promoter_id=NM_001080483 | |nearest_promoter_id=NM_001080483 | ||
|nearest_refseq=NM_001080483 | |nearest_refseq=NM_001080483 | ||
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=389827 |
|species=human | |species=human | ||
|start=133524949 | |start=133524949 | ||
|start_of_center_position=133524957 | |start_of_center_position=133524957 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(GCATTTAAACCC,+,0.00) |
| − | |transcript_name=ENST00000339996. | + | |transcript_name=ENST00000339996.4 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103017.1 | |tss_id=hg_103017.1 | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133524957 |
|---|---|
| End of the center position in the TSS region: | 133524958 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000339996.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 389827 |
| All_trans: | HGNC:33778 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001080483 |
| Entrez ID: | 389827 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001080483 |
| Nearest Ensembl: | ENSG00000187616 |
| Gene Name: | myomaker, myoblast fusion factor |
| Gene Alias: | MYOMAKER|TMEM226|TMEM8C |
| Gene Description: | myomaker, myoblast fusion factor |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCATTTAAACCC,+,0.00) |
