Difference between revisions of "TSS:Hg 16395.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|DBCCR1L1= | |DBCCR1L1= | ||
|FAM5C= | |FAM5C= | ||
| − | |all_trans= | + | |all_trans=HGNC:22393 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 11: | Line 11: | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L{{!}}DBCCR1L1{{!}}FAM5C |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_199051 | |nearest_refseq=NM_199051 | ||
|nearest_unigene=Hs.65765 | |nearest_unigene=Hs.65765 | ||
| − | |num_trans= | + | |num_trans=339479 |
|species=human | |species=human | ||
|start=190474688 | |start=190474688 | ||
|start_of_center_position=190474697 | |start_of_center_position=190474697 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-27(CCCTTTAGAGAA,+,0.00) |
|transcript_name=AK123637 | |transcript_name=AK123637 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:45, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 190474697 |
|---|---|
| End of the center position in the TSS region: | 190474698 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK123637 |
|---|---|
| Distance: | -47 |
| Num_trans: | 339479 |
| All_trans: | HGNC:22393 |
TATA-Box annotation
| Distance to TSS: | 1313 |
|---|---|
| Nearest PromoterID: | NM_001317188 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L|DBCCR1L1|FAM5C |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(CCCTTTAGAGAA,+,0.00) |
