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Difference between revisions of "TSS:Hg 16406.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000633243.1:-10
+
|all_trans=HGNC:22393
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NR_110716
 
|nearest_refseq=NR_110716
 
|nearest_unigene=Hs.602301
 
|nearest_unigene=Hs.602301
|num_trans=1
+
|num_trans=339479
 
|species=human
 
|species=human
 
|start=190478385
 
|start=190478385

Latest revision as of 16:48, 20 July 2021

Basic information about the TSS


TSS ID:hg_16406.1
Species:human
Chr:chr1
TSS Classification:no
Start:190478385
End:190478394
Strand:-
TSS Score:1
Start of the center position in the TSS region:190478389
End of the center position in the TSS region:190478390



Gene and protein annotation


Transcript_name:ENST00000633243.1
Distance:-10
GeneID:339479
HGNC/MGI_ID:HGNC:22393
UniProt_ID:
Gene_name:BMP/retinoic acid inducible neural specific 3
Gene_symbol:BRINP3
Gene_synonyms:DBCCR1L DBCCR1L1
Gene_source:HGNC:22393



Transcript annotation


Transcript_name:ENST00000633243.1
Distance:-10
Num_trans:339479
All_trans:HGNC:22393



TATA-Box annotation


Distance to TSS:130
Nearest PromoterID:NR_110716
Entrez ID:101929120
Nearest Unigene:Hs.602301
Nearest Refseq:NR_110716
Nearest Ensembl:
Gene Name:BMP/retinoic acid inducible neural specific 3
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1351
Gene Type:ncRNA
CpG%:0.045
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):