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Difference between revisions of "TSS:Hg 103127.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC013282:0 AK023162:0 AK091349:-1 ENST00000418388.5:-20 uc004cgx.6:-20 BC021231:-20 BC014304:22 NR_134506:-40 NM_152833:-42 BC111053:214 ENST00000557985.2:270 uc064xav.1:270 BC092490:270 ENST00000448040.2:366 uc064xax.1:366 ENST00000561457.2:373 NM_001256526:373 uc031tfs.1:373
+
|all_trans=HGNC:31009
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.16
 
|cpg_percent=0.16
 
|distance=0
 
|distance=0
|distance_to_tss=60
+
|distance_to_tss=52
 
|end=136118843
 
|end=136118843
 
|end_of_center_position=136118824
 
|end_of_center_position=136118824
 
|entrez_id=90120
 
|entrez_id=90120
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=-
+
|gene_alias=C9orf69
|gene_description=chromosome 9 open reading frame 69
+
|gene_description=transmembrane protein 250
 
|gene_id=90120
 
|gene_id=90120
|gene_name=chromosome 9 open reading frame 69
+
|gene_name=transmembrane protein 250
 
|gene_source=HGNC:31009
 
|gene_source=HGNC:31009
|gene_symbol=C9orf69
+
|gene_symbol=TMEM250
 
|gene_synonyms=bA83N9.1
 
|gene_synonyms=bA83N9.1
 
|gene_type=protein-coding
 
|gene_type=protein-coding
Line 22: Line 22:
 
|nearest_refseq=NM_152833
 
|nearest_refseq=NM_152833
 
|nearest_unigene=Hs.287411
 
|nearest_unigene=Hs.287411
|num_trans=18
+
|num_trans=90120
 
|species=human
 
|species=human
 
|start=136118803
 
|start=136118803

Latest revision as of 18:42, 19 July 2021

Basic information about the TSS


TSS ID:hg_103127.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136118803
End:136118843
Strand:-
TSS Score:1
Start of the center position in the TSS region:136118823
End of the center position in the TSS region:136118824



Gene and protein annotation


Transcript_name:BC013282 AK023162
Distance:0
GeneID:90120
HGNC/MGI_ID:HGNC:31009
UniProt_ID:
Gene_name:transmembrane protein 250
Gene_symbol:TMEM250
Gene_synonyms:bA83N9.1
Gene_source:HGNC:31009



Transcript annotation


Transcript_name:BC013282 AK023162
Distance:0
Num_trans:90120
All_trans:HGNC:31009



TATA-Box annotation


Distance to TSS:52
Nearest PromoterID:NR_134506
Entrez ID:90120
Nearest Unigene:Hs.287411
Nearest Refseq:NM_152833
Nearest Ensembl:ENSG00000238227
Gene Name:transmembrane protein 250
Gene Alias:C9orf69
Gene Description:transmembrane protein 250
Gene Type:protein-coding
CpG%:0.16
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):