Difference between revisions of "TSS:Mm 160801.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|CO-5= | |CO-5= | ||
|Emu1= | |Emu1= | ||
| − | |all_trans= | + | |all_trans=MGI:2155091 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=209 |
| − | |distance_to_tss= | + | |distance_to_tss=20231 |
|end=5129843 | |end=5129843 | ||
|end_of_center_position=5129843 | |end_of_center_position=5129843 | ||
| − | |entrez_id= | + | |entrez_id=NA |
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias= |
| − | |gene_description= | + | |gene_description= |
|gene_id=140703 | |gene_id=140703 | ||
|gene_name=EMI domain containing 1 | |gene_name=EMI domain containing 1 | ||
| Line 18: | Line 18: | ||
|gene_symbol=Emid1 | |gene_symbol=Emid1 | ||
|gene_synonyms=CO-5 Emu1 | |gene_synonyms=CO-5 Emu1 | ||
| − | |gene_type= | + | |gene_type= |
|hgnc_mgi_id=MGI:2155091 | |hgnc_mgi_id=MGI:2155091 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001371004 |
| − | |nearest_refseq= | + | |nearest_refseq= |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=140703 |
|species=mouse | |species=mouse | ||
|start=5129842 | |start=5129842 | ||
|start_of_center_position=5129842 | |start_of_center_position=5129842 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC012248 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_160801.1 | |tss_id=mm_160801.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 08:47, 27 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5129842 |
|---|---|
| End of the center position in the TSS region: | 5129843 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC012248 |
|---|---|
| Distance: | 209 |
| Num_trans: | 140703 |
| All_trans: | MGI:2155091 |
TATA-Box annotation
| Distance to TSS: | 20231 |
|---|---|
| Nearest PromoterID: | NM_001371004 |
| Entrez ID: | NA |
| Nearest Unigene: | |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | EMI domain containing 1 |
| Gene Alias: | |
| Gene Description: | |
| Gene Type: | |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
