Difference between revisions of "TSS:Hg 243972.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-64 | |distance_to_tss=-64 | ||
| − | |end= | + | |end=49003343 |
|end_of_center_position=49003343 | |end_of_center_position=49003343 | ||
|entrez_id=100131755 | |entrez_id=100131755 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=CXorf35 | + | |gene_alias=CXorf35{{!}}GASP4 |
| − | |gene_description= | + | |gene_description=armadillo repeat containing X-linked 4 |
|gene_id=100131755 | |gene_id=100131755 | ||
| − | |gene_name= | + | |gene_name=ARMCX4 |
|gene_source=HGNC:28615 | |gene_source=HGNC:28615 | ||
|gene_symbol=ARMCX4 | |gene_symbol=ARMCX4 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_152583 | |nearest_refseq=NM_152583 | ||
|nearest_unigene=Hs.729062 | |nearest_unigene=Hs.729062 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=49003342 |
|start_of_center_position=49003342 | |start_of_center_position=49003342 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243972.1 | |tss_id=hg_243972.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=F8W8Y7 | |uniprot_id=F8W8Y7 | ||
}} | }} | ||
Latest revision as of 13:02, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49003342 |
|---|---|
| End of the center position in the TSS region: | 49003343 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000423738.4:64 NM_001256155:64 uc031tkc.1:64 KJ904357:-364 |
TATA-Box annotation
| Distance to TSS: | -64 |
|---|---|
| Nearest PromoterID: | NM_001256155 |
| Entrez ID: | 100131755 |
| Nearest Unigene: | Hs.729062 |
| Nearest Refseq: | NM_152583 |
| Nearest Ensembl: | ENSG00000196440 |
| Gene Name: | ARMCX4 |
| Gene Alias: | CXorf35|GASP4 |
| Gene Description: | armadillo repeat containing X-linked 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
