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Difference between revisions of "TSS:Mm 160804.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000045713.3:-33 NM_001081652:-34 uc007hyy.1:-34 BC072589:-34 AK046108:431 AB182283:455
+
|all_trans=MGI:3603030
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 9: Line 9:
 
|entrez_id=192950
 
|entrez_id=192950
 
|gc_percent=0.537313
 
|gc_percent=0.537313
|gene_alias=D230024G13Rik
+
|gene_alias=D230024G13Rik{{!}}mKIAA0363
 
|gene_description=NAC alpha domain containing
 
|gene_description=NAC alpha domain containing
 
|gene_id=192950
 
|gene_id=192950
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|nearest_refseq=NM_001081652
 
|nearest_refseq=NM_001081652
 
|nearest_unigene=Mm.337771
 
|nearest_unigene=Mm.337771
|num_trans=6
+
|num_trans=192950
 
|species=mouse
 
|species=mouse
 
|start=6606019
 
|start=6606019

Latest revision as of 08:47, 27 July 2021

Basic information about the TSS


TSS ID:mm_160804.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6606019
End:6606020
Strand:-
TSS Score:1
Start of the center position in the TSS region:6606019
End of the center position in the TSS region:6606020



Gene and protein annotation


Transcript_name:ENSMUST00000045713.3
Distance:-33
GeneID:192950
HGNC/MGI_ID:MGI:3603030
UniProt_ID:Q5SWP3
Gene_name:NAC alpha domain containing
Gene_symbol:Nacad
Gene_synonyms:mKIAA0363
Gene_source:MGI:3603030



Transcript annotation


Transcript_name:ENSMUST00000045713.3
Distance:-33
Num_trans:192950
All_trans:MGI:3603030



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NM_001081652
Entrez ID:192950
Nearest Unigene:Mm.337771
Nearest Refseq:NM_001081652
Nearest Ensembl:ENSMUSG00000041073
Gene Name:NAC alpha domain containing
Gene Alias:D230024G13Rik|mKIAA0363
Gene Description:NAC alpha domain containing
Gene Type:protein-coding
CpG%:0.015
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):