Difference between revisions of "TSS:Hg 232488.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:21535 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=74 |
| − | |distance_to_tss= | + | |distance_to_tss=20 |
| − | |end= | + | |end=988632 |
|end_of_center_position=988632 | |end_of_center_position=988632 | ||
|entrez_id=84986 | |entrez_id=84986 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=Rho GTPase activating protein 19 | |gene_description=Rho GTPase activating protein 19 | ||
| − | |gene_name= | + | |gene_id=23560 |
| + | |gene_name=GTP binding protein 4 | ||
| + | |gene_source=HGNC:21535 | ||
| + | |gene_symbol=GTPBP4 | ||
| + | |gene_synonyms=CRFG FLJ10686 FLJ10690 NGB NOG1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21535 | ||
|nearest_ensembl=ENSG00000213390 | |nearest_ensembl=ENSG00000213390 | ||
|nearest_promoter_id=NM_032900 | |nearest_promoter_id=NM_032900 | ||
|nearest_refseq=NM_032900 | |nearest_refseq=NM_032900 | ||
|nearest_unigene=Hs.80305 | |nearest_unigene=Hs.80305 | ||
| − | |num_trans= | + | |num_trans=23560 |
|species=human | |species=human | ||
| − | |start= | + | |start=988631 |
|start_of_center_position=988631 | |start_of_center_position=988631 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000360059.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232488.1 | |tss_id=hg_232488.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5T3R7 | ||
}} | }} | ||
Latest revision as of 11:11, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 988631 |
|---|---|
| End of the center position in the TSS region: | 988632 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000360059.5 |
|---|---|
| Distance: | 74 |
| Num_trans: | 23560 |
| All_trans: | HGNC:21535 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_032900 |
| Entrez ID: | 84986 |
| Nearest Unigene: | Hs.80305 |
| Nearest Refseq: | NM_032900 |
| Nearest Ensembl: | ENSG00000213390 |
| Gene Name: | GTP binding protein 4 |
| Gene Alias: | - |
| Gene Description: | Rho GTPase activating protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
