Difference between revisions of "TSS:Hg 232319.1"
From referenceTSS
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|N-CDase= | |N-CDase= | ||
|NCDase= | |NCDase= | ||
| + | |all_trans=HGNC:14592 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-49 |
|distance_to_tss=-77078 | |distance_to_tss=-77078 | ||
| − | |end= | + | |end=5413838 |
|end_of_center_position=5413838 | |end_of_center_position=5413838 | ||
|entrez_id=56624 | |entrez_id=56624 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=BCDase | + | |gene_alias=BCDase{{!}}HNAC1{{!}}LCDase{{!}}N-CDase{{!}}NCDase |
|gene_description=N-acylsphingosine amidohydrolase 2 | |gene_description=N-acylsphingosine amidohydrolase 2 | ||
| − | |gene_name= | + | |gene_id=10276 |
| + | |gene_name=neuroepithelial cell transforming 1 | ||
| + | |gene_source=HGNC:14592 | ||
| + | |gene_symbol=NET1 | ||
| + | |gene_synonyms=ARHGEF8 NET1A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14592 | ||
|nearest_ensembl=ENSG00000188611 | |nearest_ensembl=ENSG00000188611 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019893 |
|nearest_refseq=NM_019893 | |nearest_refseq=NM_019893 | ||
|nearest_unigene=Hs.512645 | |nearest_unigene=Hs.512645 | ||
| − | |num_trans= | + | |num_trans=10276 |
|species=human | |species=human | ||
| − | |start= | + | |start=5413837 |
|start_of_center_position=5413837 | |start_of_center_position=5413837 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK302687 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232319.1 | |tss_id=hg_232319.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=B4DZ04 | ||
}} | }} | ||
Latest revision as of 11:08, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5413837 |
|---|---|
| End of the center position in the TSS region: | 5413838 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK302687 |
|---|---|
| Distance: | -49 |
| Num_trans: | 10276 |
| All_trans: | HGNC:14592 |
TATA-Box annotation
| Distance to TSS: | -77078 |
|---|---|
| Nearest PromoterID: | NM_019893 |
| Entrez ID: | 56624 |
| Nearest Unigene: | Hs.512645 |
| Nearest Refseq: | NM_019893 |
| Nearest Ensembl: | ENSG00000188611 |
| Gene Name: | neuroepithelial cell transforming 1 |
| Gene Alias: | BCDase|HNAC1|LCDase|N-CDase|NCDase |
| Gene Description: | N-acylsphingosine amidohydrolase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
