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Difference between revisions of "TSS:Mm 101684.1"

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Line 6: Line 6:
 
|MATIIbeta=
 
|MATIIbeta=
 
|TGR=
 
|TGR=
|all_trans=AK075600:-57 AK162087:-92 AK075947:-92 ENSMUST00000135617.1:-138 ENSMUST00000101347.9:-354 NM_001199274:-354 uc007ilq.2:-354
+
|all_trans=MGI:1913667
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 15: Line 15:
 
|entrez_id=108645
 
|entrez_id=108645
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=1110064C04Rik
+
|gene_alias=1110064C04Rik{{!}}2410018D16Rik{{!}}AI182287{{!}}AU022853{{!}}MAT-II{{!}}MATIIbeta{{!}}TGR
|gene_description="methionine adenosyltransferase II, beta"
+
|gene_description=methionine adenosyltransferase II, beta
 
|gene_id=108645
 
|gene_id=108645
|gene_name="methionine adenosyltransferase II, beta"
+
|gene_name=methionine adenosyltransferase II, beta
 
|gene_source=MGI:1913667
 
|gene_source=MGI:1913667
 
|gene_symbol=Mat2b
 
|gene_symbol=Mat2b
Line 28: Line 28:
 
|nearest_refseq=NM_134017
 
|nearest_refseq=NM_134017
 
|nearest_unigene=Mm.293771
 
|nearest_unigene=Mm.293771
|num_trans=7
+
|num_trans=108645
 
|species=mouse
 
|species=mouse
 
|start=40694838
 
|start=40694838

Latest revision as of 11:05, 26 July 2021

Basic information about the TSS


TSS ID:mm_101684.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:40694838
End:40694849
Strand:-
TSS Score:1
Start of the center position in the TSS region:40694843
End of the center position in the TSS region:40694844



Gene and protein annotation


Transcript_name:AK075600
Distance:-57
GeneID:108645
HGNC/MGI_ID:MGI:1913667
UniProt_ID:
Gene_name:methionine adenosyltransferase II, beta
Gene_symbol:Mat2b
Gene_synonyms:1110064C04Rik 2410018D16Rik MATIIbeta
Gene_source:MGI:1913667



Transcript annotation


Transcript_name:AK075600
Distance:-57
Num_trans:108645
All_trans:MGI:1913667



TATA-Box annotation


Distance to TSS:359
Nearest PromoterID:NM_001199274
Entrez ID:108645
Nearest Unigene:Mm.293771
Nearest Refseq:NM_134017
Nearest Ensembl:ENSMUSG00000042032
Gene Name:methionine adenosyltransferase II, beta
Gene Alias:1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR
Gene Description:methionine adenosyltransferase II, beta
Gene Type:protein-coding
CpG%:0.09
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):