Difference between revisions of "TSS:Hg 103883.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:2550 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 12: | Line 12: | ||
|gene_description=CELF2 antisense RNA 1 | |gene_description=CELF2 antisense RNA 1 | ||
|gene_id=10659 | |gene_id=10659 | ||
| − | |gene_name= | + | |gene_name=CUGBP Elav-like family member 2 |
|gene_source=HGNC:2550 | |gene_source=HGNC:2550 | ||
|gene_symbol=CELF2 | |gene_symbol=CELF2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001012713 | |nearest_refseq=NM_001012713 | ||
|nearest_unigene=Hs.729598 | |nearest_unigene=Hs.729598 | ||
| − | |num_trans= | + | |num_trans=10659 |
|species=human | |species=human | ||
|start=11320842 | |start=11320842 | ||
|start_of_center_position=11320844 | |start_of_center_position=11320844 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-78(CCTCAAAGAGCC,+,0.00) |
|transcript_name=AF086447 | |transcript_name=AF086447 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11320844 |
|---|---|
| End of the center position in the TSS region: | 11320845 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF086447 |
|---|---|
| Distance: | 224 |
| Num_trans: | 10659 |
| All_trans: | HGNC:2550 |
TATA-Box annotation
| Distance to TSS: | 23830 |
|---|---|
| Nearest PromoterID: | NR_126062 |
| Entrez ID: | 414196 |
| Nearest Unigene: | Hs.729598 |
| Nearest Refseq: | NM_001012713 |
| Nearest Ensembl: | |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | C10orf31 |
| Gene Description: | CELF2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -78(CCTCAAAGAGCC,+,0.00) |
