Difference between revisions of "TSS:Hg 104260.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:11215 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:11215 | |gene_source=HGNC:11215 | ||
|gene_symbol=SPAG6 | |gene_symbol=SPAG6 | ||
| − | |gene_synonyms=CT141 Repro-SA-1 | + | |gene_synonyms=CFAP194 CT141 FAP194 PF16 Repro-SA-1 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:11215 | |hgnc_mgi_id=HGNC:11215 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_036533 | |nearest_refseq=NR_036533 | ||
|nearest_unigene=Hs.7444 | |nearest_unigene=Hs.7444 | ||
| − | |num_trans= | + | |num_trans=9576 |
|species=human | |species=human | ||
|start=22391797 | |start=22391797 | ||
|start_of_center_position=22391813 | |start_of_center_position=22391813 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000490361.5 ENST00000487973 | + | |transcript_name=ENST00000490361.5 ENST00000487973.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104260.1 | |tss_id=hg_104260.1 | ||
Latest revision as of 19:06, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22391813 |
|---|---|
| End of the center position in the TSS region: | 22391814 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000490361.5 ENST00000487973.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9576 |
| All_trans: | HGNC:11215 |
TATA-Box annotation
| Distance to TSS: | 46116 |
|---|---|
| Nearest PromoterID: | NR_036533 |
| Entrez ID: | 100499489 |
| Nearest Unigene: | Hs.7444 |
| Nearest Refseq: | NR_036533 |
| Nearest Ensembl: | |
| Gene Name: | sperm associated antigen 6 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100499489 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
