Difference between revisions of "TSS:Hg 224276.1"
From referenceTSS
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|PAGEN2= | |PAGEN2= | ||
|PTF1-p48= | |PTF1-p48= | ||
| + | |all_trans=HGNC:23734 | ||
|bHLHa29= | |bHLHa29= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1017 |
|end=23193343 | |end=23193343 | ||
|end_of_center_position=23193329 | |end_of_center_position=23193329 | ||
|entrez_id=256297 | |entrez_id=256297 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=PACA | + | |gene_alias=PACA{{!}}PAGEN2{{!}}PTF1-p48{{!}}bHLHa29{{!}}p48 |
| − | |gene_description= | + | |gene_description=pancreas associated transcription factor 1a |
| − | |gene_name=PTF1A | + | |gene_id=256297 |
| + | |gene_name=pancreas associated transcription factor 1a | ||
| + | |gene_source=HGNC:23734 | ||
| + | |gene_symbol=PTF1A | ||
| + | |gene_synonyms=PTF1-p48 bHLHa29 p48 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23734 | ||
|nearest_ensembl=ENSG00000168267 | |nearest_ensembl=ENSG00000168267 | ||
|nearest_promoter_id=NM_178161 | |nearest_promoter_id=NM_178161 | ||
|nearest_refseq=NM_178161 | |nearest_refseq=NM_178161 | ||
|nearest_unigene=Hs.351503 | |nearest_unigene=Hs.351503 | ||
| − | |num_trans= | + | |num_trans=256297 |
|species=human | |species=human | ||
|start=23193314 | |start=23193314 | ||
|start_of_center_position=23193328 | |start_of_center_position=23193328 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000639873.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224276.1 | |tss_id=hg_224276.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1W2PPH2 | ||
}} | }} | ||
Latest revision as of 08:18, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23193328 |
|---|---|
| End of the center position in the TSS region: | 23193329 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000639873.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 256297 |
| All_trans: | HGNC:23734 |
TATA-Box annotation
| Distance to TSS: | 1017 |
|---|---|
| Nearest PromoterID: | NM_178161 |
| Entrez ID: | 256297 |
| Nearest Unigene: | Hs.351503 |
| Nearest Refseq: | NM_178161 |
| Nearest Ensembl: | ENSG00000168267 |
| Gene Name: | pancreas associated transcription factor 1a |
| Gene Alias: | PACA|PAGEN2|PTF1-p48|bHLHa29|p48 |
| Gene Description: | pancreas associated transcription factor 1a |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
