Difference between revisions of "TSS:Hg 104305.1"
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:25428 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-1 |
|distance_to_tss=-166654 | |distance_to_tss=-166654 | ||
|end=24042142 | |end=24042142 | ||
| Line 8: | Line 9: | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
| + | |gene_id=56243 | ||
|gene_name=KIAA1217 | |gene_name=KIAA1217 | ||
| + | |gene_source=HGNC:25428 | ||
| + | |gene_symbol=KIAA1217 | ||
| + | |gene_synonyms=DKFZP761L0424 ETL4 SKT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25428 | ||
|nearest_ensembl=ENSG00000120549 | |nearest_ensembl=ENSG00000120549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282768 |
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=56243 |
|species=human | |species=human | ||
|start=24042131 | |start=24042131 | ||
|start_of_center_position=24042136 | |start_of_center_position=24042136 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(GTGTTTAAAAGA,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000636305.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104305.1 | |tss_id=hg_104305.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1B0GU17 | ||
}} | }} | ||
Latest revision as of 19:07, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24042136 |
|---|---|
| End of the center position in the TSS region: | 24042137 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636305.1 |
|---|---|
| Distance: | -1 |
| Num_trans: | 56243 |
| All_trans: | HGNC:25428 |
TATA-Box annotation
| Distance to TSS: | -166654 |
|---|---|
| Nearest PromoterID: | NM_001282768 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GTGTTTAAAAGA,-,0.00) |
