Difference between revisions of "TSS:Hg 104360.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=30045 |
|end=24922565 | |end=24922565 | ||
|end_of_center_position=24922561 | |end_of_center_position=24922561 | ||
| Line 13: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000099256 | |nearest_ensembl=ENSG00000099256 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282786 |
|nearest_refseq=NM_020200 | |nearest_refseq=NM_020200 | ||
|nearest_unigene=Hs.405619 | |nearest_unigene=Hs.405619 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=24922560 | |start_of_center_position=24922560 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-35(GGTTTTATAAAG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24922560 |
|---|---|
| End of the center position in the TSS region: | 24922561 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 30045 |
|---|---|
| Nearest PromoterID: | NM_001282786 |
| Entrez ID: | 56952 |
| Nearest Unigene: | Hs.405619 |
| Nearest Refseq: | NM_020200 |
| Nearest Ensembl: | ENSG00000099256 |
| Gene Name: | PRTFDC1 |
| Gene Alias: | HHGP |
| Gene Description: | phosphoribosyl transferase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GGTTTTATAAAG,-,0.00) |
