Difference between revisions of "TSS:Hg 104384.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7601 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=22 | |distance=22 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-27 |
|end=25934207 | |end=25934207 | ||
|end_of_center_position=25934203 | |end_of_center_position=25934203 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:7601 | |hgnc_mgi_id=HGNC:7601 | ||
|nearest_ensembl=ENSG00000095777 | |nearest_ensembl=ENSG00000095777 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368265 |
|nearest_refseq=NM_017433 | |nearest_refseq=NM_017433 | ||
|nearest_unigene=Hs.662630 | |nearest_unigene=Hs.662630 | ||
| − | |num_trans= | + | |num_trans=53904 |
|species=human | |species=human | ||
|start=25934197 | |start=25934197 | ||
|start_of_center_position=25934202 | |start_of_center_position=25934202 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK310494 | + | |transcript_name=ENST00000642197.1 ENST00000642920.2 AK310494 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104384.1 | |tss_id=hg_104384.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8NEV4 |
}} | }} | ||
Latest revision as of 19:08, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 25934202 |
|---|---|
| End of the center position in the TSS region: | 25934203 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000642197.1 ENST00000642920.2 AK310494 |
|---|---|
| Distance: | 22 |
| Num_trans: | 53904 |
| All_trans: | HGNC:7601 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001368265 |
| Entrez ID: | 53904 |
| Nearest Unigene: | Hs.662630 |
| Nearest Refseq: | NM_017433 |
| Nearest Ensembl: | ENSG00000095777 |
| Gene Name: | myosin IIIA |
| Gene Alias: | DFNB30 |
| Gene Description: | myosin IIIA |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
