Difference between revisions of "TSS:Hg 104604.1"
From referenceTSS
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| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| − | |all_trans= | + | |all_trans=HGNC:11642 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-3 |
|end=31319227 | |end=31319227 | ||
|end_of_center_position=31319213 | |end_of_center_position=31319213 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
|gene_id=6935 | |gene_id=6935 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:11642 | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001174095 |
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| − | |num_trans= | + | |num_trans=6935 |
|species=human | |species=human | ||
|start=31319198 | |start=31319198 | ||
|start_of_center_position=31319212 | |start_of_center_position=31319212 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-3(GCATTTAGACAC,+,0.00) |
| − | |transcript_name=ENST00000559858.5 ENST00000560721.6 ENST00000558440.5 ENST00000424869. | + | |transcript_name=ENST00000559858.5 ENST00000560721.6 ENST00000558440.5 ENST00000424869.6 ENST00000437844.6 ENST00000542815.7 AK307510 AK091478 AK299541 AK310924 AK311137 AK314683 U12170 AK308822 BC009572 AL831979 BC065705 BC112392 BC107781 AK300830 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104604.1 | |tss_id=hg_104604.1 | ||
Latest revision as of 19:13, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 31319212 |
|---|---|
| End of the center position in the TSS region: | 31319213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000559858.5 ENST00000560721.6 ENST00000558440.5 ENST00000424869.6 ENST00000437844.6 ENST00000542815.7 AK307510 AK091478 AK299541 AK310924 AK311137 AK314683 U12170 AK308822 BC009572 AL831979 BC065705 BC112392 BC107781 AK300830 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6935 |
| All_trans: | HGNC:11642 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001174095 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -3(GCATTTAGACAC,+,0.00) |
