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Difference between revisions of "TSS:Hg 104680.1"

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{{TSSDetail
 
{{TSSDetail
 
|ICER=
 
|ICER=
|all_trans=AF069065:14 U44836:14 ENST00000356917.9:-16 uc001iyo.4:-16 ENST00000488328.5:-30 uc001iyn.4:-30 AK290612:-30 ENST00000487763.5:-36 ENST00000473940.5:-36 NM_001267569:-36 NM_001267568:-36 NM_182718:-36 NM_182717:-36 NM_182720:-36 NM_182719:-36 uc001iyl.4:-36 uc001iym.4:-36 D14826:-36
+
|all_trans=HGNC:2352
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=14
 
|distance=14
|distance_to_tss=42
+
|distance_to_tss=36
 
|end=35195176
 
|end=35195176
 
|end_of_center_position=35195170
 
|end_of_center_position=35195170
 
|entrez_id=1390
 
|entrez_id=1390
 
|gc_percent=0.40796
 
|gc_percent=0.40796
|gene_alias=CREM-2
+
|gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2
 
|gene_description=cAMP responsive element modulator
 
|gene_description=cAMP responsive element modulator
 
|gene_id=1390
 
|gene_id=1390
Line 21: Line 21:
 
|hgnc_mgi_id=HGNC:2352
 
|hgnc_mgi_id=HGNC:2352
 
|nearest_ensembl=ENSG00000095794
 
|nearest_ensembl=ENSG00000095794
|nearest_promoter_id=NM_182719
+
|nearest_promoter_id=NM_182720
 
|nearest_refseq=NM_001881
 
|nearest_refseq=NM_001881
 
|nearest_unigene=Hs.200250
 
|nearest_unigene=Hs.200250
|num_trans=18
+
|num_trans=1390
 
|species=human
 
|species=human
 
|start=35195162
 
|start=35195162

Latest revision as of 19:15, 19 July 2021

Basic information about the TSS


TSS ID:hg_104680.1
Species:human
Chr:chr10
TSS Classification:no
Start:35195162
End:35195176
Strand:+
TSS Score:1
Start of the center position in the TSS region:35195169
End of the center position in the TSS region:35195170



Gene and protein annotation


Transcript_name:AF069065 U44836
Distance:14
GeneID:1390
HGNC/MGI_ID:HGNC:2352
UniProt_ID:
Gene_name:cAMP responsive element modulator
Gene_symbol:CREM
Gene_synonyms:hCREM-2
Gene_source:HGNC:2352



Transcript annotation


Transcript_name:AF069065 U44836
Distance:14
Num_trans:1390
All_trans:HGNC:2352



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NM_182720
Entrez ID:1390
Nearest Unigene:Hs.200250
Nearest Refseq:NM_001881
Nearest Ensembl:ENSG00000095794
Gene Name:cAMP responsive element modulator
Gene Alias:CREM-2|ICER|hCREM-2
Gene Description:cAMP responsive element modulator
Gene Type:protein-coding
CpG%:0
GC%:0.40796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):