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Difference between revisions of "TSS:Hg 104681.1"

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{{TSSDetail
 
{{TSSDetail
 
|ICER=
 
|ICER=
|all_trans=AF069065:-241 U44836:-241 ENST00000356917.9:-284 uc001iyo.4:-284 ENST00000488328.5:-298 uc001iyn.4:-298 AK290612:-298 ENST00000487763.5:-304 ENST00000473940.5:-304 NM_001267569:-304 NM_001267568:-304 NM_182718:-304 NM_182717:-304 NM_182720:-304 NM_182719:-304 uc001iyl.4:-304 uc001iym.4:-304 D14826:-304 ENST00000488741.5:424 uc001iyp.4:424 ENST00000474931.5:461 NM_001267570:461 NM_182724:461 NM_182723:461 NM_182721:461 NR_051972:461 NR_051971:461 uc001iyr.4:461 AK289379:461 AK291566:463 ENST00000468236.5:468 uc031pud.2:468 ENST00000344351.5:476 uc001iyt.4:476
+
|all_trans=HGNC:2352
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=-241
 
|distance=-241
|distance_to_tss=309
+
|distance_to_tss=303
 
|end=35195441
 
|end=35195441
 
|end_of_center_position=35195436
 
|end_of_center_position=35195436
 
|entrez_id=1390
 
|entrez_id=1390
 
|gc_percent=0.432836
 
|gc_percent=0.432836
|gene_alias=CREM-2
+
|gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2
 
|gene_description=cAMP responsive element modulator
 
|gene_description=cAMP responsive element modulator
 
|gene_id=1390
 
|gene_id=1390
Line 21: Line 21:
 
|hgnc_mgi_id=HGNC:2352
 
|hgnc_mgi_id=HGNC:2352
 
|nearest_ensembl=ENSG00000095794
 
|nearest_ensembl=ENSG00000095794
|nearest_promoter_id=NM_182719
+
|nearest_promoter_id=NM_182720
 
|nearest_refseq=NM_001881
 
|nearest_refseq=NM_001881
 
|nearest_unigene=Hs.200250
 
|nearest_unigene=Hs.200250
|num_trans=34
+
|num_trans=1390
 
|species=human
 
|species=human
 
|start=35195430
 
|start=35195430

Latest revision as of 19:15, 19 July 2021

Basic information about the TSS


TSS ID:hg_104681.1
Species:human
Chr:chr10
TSS Classification:no
Start:35195430
End:35195441
Strand:+
TSS Score:1
Start of the center position in the TSS region:35195435
End of the center position in the TSS region:35195436



Gene and protein annotation


Transcript_name:AF069065 U44836
Distance:-241
GeneID:1390
HGNC/MGI_ID:HGNC:2352
UniProt_ID:
Gene_name:cAMP responsive element modulator
Gene_symbol:CREM
Gene_synonyms:hCREM-2
Gene_source:HGNC:2352



Transcript annotation


Transcript_name:AF069065 U44836
Distance:-241
Num_trans:1390
All_trans:HGNC:2352



TATA-Box annotation


Distance to TSS:303
Nearest PromoterID:NM_182720
Entrez ID:1390
Nearest Unigene:Hs.200250
Nearest Refseq:NM_001881
Nearest Ensembl:ENSG00000095794
Gene Name:cAMP responsive element modulator
Gene Alias:CREM-2|ICER|hCREM-2
Gene Description:cAMP responsive element modulator
Gene Type:protein-coding
CpG%:0
GC%:0.432836
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):