Difference between revisions of "TSS:Hg 104760.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ZNF487P= | |ZNF487P= | ||
| − | |all_trans=ENST00000456416. | + | |all_trans=NM_001355450:0 NM_001355444:0 ENST00000456416.6:3 ENST00000437590.3:3 AK302442:3 ENST00000490208.1:25 ENST00000451167.2:35 ENST00000652684.1:-258 NM_001355445:-258 NM_001355448:-258 NM_001355449:-258 NM_001355447:-258 NM_001355446:-258 ENST00000315429.11:-265 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=43437123 | |end=43437123 | ||
|end_of_center_position=43437115 | |end_of_center_position=43437115 | ||
|entrez_id=642819 | |entrez_id=642819 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=KRBO1 | + | |gene_alias=KRBO1{{!}}ZNF487P |
|gene_description=zinc finger protein 487 | |gene_description=zinc finger protein 487 | ||
|gene_id=642819 | |gene_id=642819 | ||
| Line 17: | Line 17: | ||
|gene_symbol=ZNF487 | |gene_symbol=ZNF487 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:23488 | |hgnc_mgi_id=HGNC:23488 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000243660 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355444 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001355444 |
|nearest_unigene=Hs.719657 | |nearest_unigene=Hs.719657 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=43437105 | |start=43437105 | ||
|start_of_center_position=43437114 | |start_of_center_position=43437114 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001355450.1 NM_001355444.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104760.1 | |tss_id=hg_104760.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:16, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 43437114 |
|---|---|
| End of the center position in the TSS region: | 43437115 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001355450.1 NM_001355444.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | NM_001355450:0 NM_001355444:0 ENST00000456416.6:3 ENST00000437590.3:3 AK302442:3 ENST00000490208.1:25 ENST00000451167.2:35 ENST00000652684.1:-258 NM_001355445:-258 NM_001355448:-258 NM_001355449:-258 NM_001355447:-258 NM_001355446:-258 ENST00000315429.11:-265 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001355444 |
| Entrez ID: | 642819 |
| Nearest Unigene: | Hs.719657 |
| Nearest Refseq: | NM_001355444 |
| Nearest Ensembl: | ENSG00000243660 |
| Gene Name: | zinc finger protein 487 |
| Gene Alias: | KRBO1|ZNF487P |
| Gene Description: | zinc finger protein 487 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
